提供:TogoWiki
コード例
<script language="javascript" src="/js/dalliance-compiled.js"></script>
<script language="javascript">
new Browser({
chr: '22',
viewStart: 30000000,
viewEnd: 30030000,
cookieKey: 'human',
chains: {
hg19ToHg18: new Chainset('http://www.derkholm.net:8080/das/hg19ToHg18/', 'GRCh37', 'NCBI36',
{
speciesName: 'Human',
taxon: 9606,
auth: 'GRCh',
version: 37
})
},
sources: [{name: 'Genome',
uri: 'http://www.derkholm.net:8080/das/hg18comp/',
desc: 'Human reference genome build NCBI36',
tier_type: 'sequence',
provides_entrypoints: true},
{name: 'Genes',
desc: 'Gene structures from Ensembl 54',
uri: 'http://www.derkholm.net:8080/das/hsa_54_36p/',
collapseSuperGroups: true,
provides_karyotype: true,
provides_search: true},
{name: 'Repeats',
desc: 'Repeat annotation from Ensembl 54',
uri: 'http://www.derkholm.net:8080/das/hsa_54_36p/',
stylesheet_uri: 'http://www.derkholm.net/dalliance-test/stylesheets/ens-repeats.xml'},
{name: 'CpG',
desc: 'CpG observed/expected ratio',
uri: 'http://www.derkholm.net:8080/das/hg18comp/',
stylesheet_uri: 'http://www.derkholm.net/dalliance-test/stylesheets/cpg.xml'},
{name: 'MeDIP-raw',
desc: 'MeDIP-seq reads from Nature Biotech. 26:779-785',
uri: 'http://www.derkholm.net:8080/das/medipseq_reads/'},
{name: 'MeDIP-seq',
desc: 'Human sperm MeDIP-seq (Batman normalized) from Nature Biotech. 26:779-785',
uri: 'http://www.ebi.ac.uk/das-srv/genomicdas/das/batman_seq_SP/'},
{name: 'MeDIP-chip',
desc: 'Huamn sperm MeDIP-chip (Batman-normalized)',
uri: 'http://www.ebi.ac.uk/das-srv/genomicdas/das/batman_SP/'}],
browserLinks: {
Ensembl: 'http://ncbi36.ensembl.org/Homo_sapiens/Location/View?r=${chr}:${start}-${end}',
UCSC: 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg18&position=chr${chr}:${start}-${end}'
},
searchEndpoint: new DASSource('http://www.derkholm.net:8080/das/hsa_54_36p/')
});
</script>
<div id='svgHolder'></div>