BH12.12/stanza titech/taxon general
提供：TogoWiki
（版間での差分）
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| + | [http://evolve.bio.titech.ac.jp/sparql?default-graph-uri=&query=PREFIX+rdfs%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2000%2F01%2Frdf-schema%23%3E%0D%0APREFIX+srs%3A+%3Chttp%3A%2F%2Ftrace.ncbi.nlm.nih.gov%2FTraces%2Fsra%2Fsra.cgi%3Fsample%3D%3E%0D%0APREFIX+envo%3A+%3Chttp%3A%2F%2Fpurl.bioontology.org%2Fontology%2FENVO%2F%3E%0D%0APREFIX+gaz%3A+%3Chttp%3A%2F%2Fpurl.org%2Fobo%2Fowl%2FGAZ%23%3E%0D%0APREFIX+fma%3A+%3Chttp%3A%2F%2Fsig.uw.edu%2Ffma%23%3E%0D%0APREFIX+dc%3A+%3Chttp%3A%2F%2Fpurl.org%2Fdc%2Felements%2F1.1%2F%3E%0D%0APREFIX+ncbitaxon%3A+%3Chttp%3A%2F%2Fpurl.org%2Fobo%2Fowl%2FNCBITaxon%23%3E%0D%0APREFIX+meo%3A+%3Chttp%3A%2F%2Fpurl.jp%2Fbio%2F11%2Fmeo%2F%3E%0D%0APREFIX+rdf%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F1999%2F02%2F22-rdf-syntax-ns%23%3E%0D%0APREFIX+owl%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2002%2F07%2Fowl%23%3E%0D%0APREFIX+go%3A+%3Chttp%3A%2F%2Fwww.geneontology.org%2Fformats%2FoboInOwl%23%3E%0D%0A%0D%0A%0D%0ASELECT++%3Fncbitaxon_id+%3Fncbitaxon_label+%3Fncbitaxon_rank+%3Fncbitaxon_superclass+%3Fdbxref+%0D%0AWHERE{%0D%0A%09ncbitaxon%3ANCBITaxon_584626%09rdfs%3Alabel%09%3Fncbitaxon_label.%0D%0A%09%3Fncbitaxon_id%09rdfs%3Alabel%09%3Fncbitaxon_label.%0D%0A%0D%0A%09OPTIONAL{%0D%0A%09%09%3Fncbitaxon_id+go%3AhasDbXref%2Frdfs%3Alabel+%3Fdbxref.%0D%0A%09}%0D%0A%09OPTIONAL{%0D%0A%09%09%3Fncbitaxon_id%09+%3Chas_rank%3E%09%3Fncbitaxon_rank.%09%0D%0A%09}%0D%0A%09OPTIONAL{%0D%0A%09%09%3Fncbitaxon_id%09rdfs%3AsubClassOf%09%3Fncbitaxon_superclass.%0D%0A%09}%0D%0A}&format=text%2Fhtml&timeout=0&debug=on 実行結果] | ||
2013年5月27日 (月) 03:22時点における最新版
Taxon General
- スタンザ概要--------------------------
- ある系統に関する基本情報のスタンザ
- 入力----------------------------------
- NCBI Taxon ID
- 出力----------------------------------
| 変数名 | 説明 | URI or literal |
|---|---|---|
| ?ncbitaxon_id | NCBI Taxon ID | URI |
| ?ncbitaxon_label | NCBI Taxon名 | literal |
| ?ncbitaxon_rank | タクソン名 | URI |
| ?ncbitaxon_superclass | 親クラス | URI |
| ?dbxref | literal |
- 使用グラフ----------------------------
- ncbitaxon.owl
- メモ----------------------------------
- SPARQL query--------------------------
例：NCBITaxon_584626に関する情報
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX srs: <http://trace.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?sample=>
PREFIX envo: <http://purl.bioontology.org/ontology/ENVO/>
PREFIX gaz: <http://purl.org/obo/owl/GAZ#>
PREFIX fma: <http://sig.uw.edu/fma#>
PREFIX dc: <http://purl.org/dc/elements/1.1/>
PREFIX ncbitaxon: <http://purl.org/obo/owl/NCBITaxon#>
PREFIX meo: <http://purl.jp/bio/11/meo/>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX go: <http://www.geneontology.org/formats/oboInOwl#>
SELECT ?ncbitaxon_id ?ncbitaxon_label ?ncbitaxon_rank ?ncbitaxon_superclass ?dbxref
WHERE{
ncbitaxon:NCBITaxon_584626 rdfs:label ?ncbitaxon_label.
?ncbitaxon_id rdfs:label ?ncbitaxon_label.
OPTIONAL{
?ncbitaxon_id go:hasDbXref/rdfs:label ?dbxref.
}
OPTIONAL{
?ncbitaxon_id <has_rank> ?ncbitaxon_rank.
}
OPTIONAL{
?ncbitaxon_id rdfs:subClassOf ?ncbitaxon_superclass.
}
}
