BH12.12/stanza titech/Disease Information
提供：TogoWiki
（版間での差分）
(→Disease Information) |
(→Disease Information) |
||
| 29行： | 29行： | ||
*使用グラフ---------------------------- | *使用グラフ---------------------------- | ||
| - | *:PDO_ver0. | + | *:PDO_ver0.1.owl |
*:CSSO_ver0.1.owl | *:CSSO_ver0.1.owl | ||
*:mapping_ver2.ttl | *:mapping_ver2.ttl | ||
| 41行： | 41行： | ||
SELECT ?diseaseName ?synonymList ?def ?class ?symptomList | SELECT ?diseaseName ?synonymList ?def ?class ?symptomList | ||
| - | FROM <http://localhost:8890/PDO/test/PDO_ver0. | + | FROM <http://localhost:8890/PDO/test/PDO_ver0.1.owl> |
FROM <http://localhost:8890/PDO/test/CSSO_ver0.1.owl> | FROM <http://localhost:8890/PDO/test/CSSO_ver0.1.owl> | ||
FROM <http://localhost:8890/PDO/test/mapping_ver2.ttl> | FROM <http://localhost:8890/PDO/test/mapping_ver2.ttl> | ||
| 70行： | 70行： | ||
} | } | ||
}</pre> | }</pre> | ||
| - | [http://evolve.bio.titech.ac.jp/sparql?default-graph-uri=&query=prefix+pdo%3A+%3Chttp%3A%2F%2Fpurl.jp%2Fbio%2F11%2Fpdo%2F%3E+%0D%0Aprefix+obo%3A+%3Chttp%3A%2F%2Fpurl.obolibrary.org%2Fobo%2F%3E%0D%0Aprefix+csso%3A+%3Chttp%3A%2F%2Fpurl.jp%2Fbio%2F11%2Fcsso%2F%3E+%0D%0ASELECT+%3FdiseaseName++%3FsynonymList++%3Fdef++%3Fclass+%3FsymptomList%0D%0AFROM+%3Chttp%3A%2F%2Flocalhost%3A8890%2FPDO%2Ftest%2FPDO_ver0. | + | [http://evolve.bio.titech.ac.jp/sparql?default-graph-uri=&query=prefix+pdo%3A+%3Chttp%3A%2F%2Fpurl.jp%2Fbio%2F11%2Fpdo%2F%3E+%0D%0Aprefix+obo%3A+%3Chttp%3A%2F%2Fpurl.obolibrary.org%2Fobo%2F%3E%0D%0Aprefix+csso%3A+%3Chttp%3A%2F%2Fpurl.jp%2Fbio%2F11%2Fcsso%2F%3E+%0D%0ASELECT+%3FdiseaseName++%3FsynonymList++%3Fdef++%3Fclass+%3FsymptomList%0D%0AFROM+%3Chttp%3A%2F%2Flocalhost%3A8890%2FPDO%2Ftest%2FPDO_ver0.1.owl%3E%0D%0AFROM+%3Chttp%3A%2F%2Flocalhost%3A8890%2FPDO%2Ftest%2FCSSO_ver0.1.owl%3E%0D%0AFROM+%3Chttp%3A%2F%2Flocalhost%3A8890%2FPDO%2Ftest%2Fmapping_ver2.ttl%3E%0D%0A%0D%0AWHERE+%0D%0A%7B%0D%0Apdo%3APDO_000173%09rdfs%3Alabel%09%3FdiseaseName.%0D%0A%7BSELECT+%28GROUP_CONCAT%28%3Fsynonym%3B+SEPARATOR+%3D+%22%2C%22%29+AS+%3FsynonymList%29%0D%0AWHERE%7B%0D%0Apdo%3APDO_000173%09skos%3AaltLabel%09%3Fsynonym.%0D%0A%7D%7D%0D%0A%0D%0A%7BSELECT++%28GROUP_CONCAT%28%3Fsymptoms%3B+SEPARATOR+%3D+%22%2C%22%29+AS+%3FsymptomList%29%0D%0AWHERE%7B%0D%0Apdo%3APDO_000173%09pdo%3AhasSymptomOf%09%3Fsymptom.%0D%0A%3Fsymptom%09rdfs%3Alabel%09%3Fsymptoms.%0D%0A%7D%7D%0D%0AOPTIONAL%7B%0D%0Apdo%3APDO_000173%09obo%3AIAO_0000115%09%3Fdef.%0D%0A%7D%0D%0AOPTIONAL%7B%0D%0Apdo%3APDO_000173%09rdfs%3AsubClassOf%2B%09%3FupperClass.%0D%0A%3FupperClass+rdfs%3AsubClassOf+pdo%3APDO_000001.%0D%0A%3FupperClass%09rdfs%3Alabel%09%3Fclass.%0D%0A%7D%0D%0A%7D&format=text%2Fhtml&timeout=0&debug=on 実行結果] |
2013年5月31日 (金) 02:11時点における最新版
Disease Information
- スタンザ概要--------------------------
- ある病気の基本情報を取得
- 入力----------------------------------
- PDO ID
- 出力----------------------------------
| 変数名 | 説明 | URI or literal |
|---|---|---|
| ?diseaseName | 病名 | literal |
| ?synonymList | 同義語のリスト | literal |
| ?def | 病気の定義 | literal |
| ?class | 病気のクラス | literal |
| ?symptomList | 症状のリスト | literal |
- 使用グラフ----------------------------
- PDO_ver0.1.owl
- CSSO_ver0.1.owl
- mapping_ver2.ttl
- メモ----------------------------------
- SPARQL query--------------------------
例：Myocarditis（pdo:PDO_000173）に関する情報
PREFIX pdo: <http://purl.jp/bio/11/pdo/>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX csso: <http://purl.jp/bio/11/csso/>
SELECT ?diseaseName ?synonymList ?def ?class ?symptomList
FROM <http://localhost:8890/PDO/test/PDO_ver0.1.owl>
FROM <http://localhost:8890/PDO/test/CSSO_ver0.1.owl>
FROM <http://localhost:8890/PDO/test/mapping_ver2.ttl>
WHERE
{
pdo:PDO_000173 rdfs:label ?diseaseName.
{
SELECT (GROUP_CONCAT(?synonym; SEPARATOR = " , ") AS ?synonymList)
WHERE{
pdo:PDO_000173 skos:altLabel ?synonym.
}
}
{
SELECT (GROUP_CONCAT(?symptoms; SEPARATOR = " , ") AS ?symptomList)
WHERE{
pdo:PDO_000173 pdo:hasSymptomOf ?symptom.
?symptom rdfs:label ?symptoms.
}
}
OPTIONAL{
pdo:PDO_000173 obo:IAO_0000115 ?def.
}
OPTIONAL{
pdo:PDO_000173 rdfs:subClassOf+ ?upperClass.
?upperClass rdfs:subClassOf pdo:PDO_000001.
?upperClass rdfs:label ?class.
}
}
