SPARQLthon/TogoGenomeUpdate/2017 11

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目次

バージョン

  • refseq: release85
  • uniprot: 2017_11

DBファイルサイズ

381G

更新時期

  • 開始: 2017-11-25 02:19
  • 終了: 2017-12-05 02:22


トリプル数統計

総トリプル数

10,644,673,042トリプル(約100億)

グラフ一覧とトリプル数

グラフURIトリプル数
http://togogenome.org/graph/uniprot5724127075
http://togogenome.org/graph/refseq3339790261
http://togogenome.org/graph/edgestore871611765
http://togogenome.org/graph/assembly_report299719759
http://togogenome.org/graph/tgup159374312
http://togogenome.org/graph/goup122299652
http://togogenome.org/graph/stats86598252
http://togogenome.org/graph/taxonomy23483086
http://togogenome.org/graph/gazetteer7062536
http://togogenome.org/graph/gotax6208588
http://togogenome.org/graph/gold1600208
http://togogenome.org/graph/go1573748
http://togogenome.org/graph/brc914050
http://togogenome.org/graph/tgtax199422
http://togogenome.org/graph/so43060
http://togogenome.org/graph/taxonomy_lite18815
http://togogenome.org/graph/insdc14238
http://togogenome.org/graph/gmo6956
http://togogenome.org/graph/meo4468
http://togogenome.org/graph/meo_descendants4247
http://togogenome.org/graph/pdo_mapping3305
http://togogenome.org/graph/pdo2881
http://togogenome.org/graph/csso2537
http://togogenome.org/graph/mpo1653
http://togogenome.org/graph/mpo_descendants1482
http://togogenome.org/graph/mccv675
http://togogenome.org/graph/faldo232
http://togogenome.org/graph27

データの更新

UniProt

rdf:IDのエラーのうち、Illegal rdf:ID のエラーについては解消された
詳細
Duplicated rdf:ID valueについては解消の目処が立っていない
2017_11版では12Taxonomyがエラーになった

store@ep1(2):~/rdf/uniprot/2017_11% grep -A1 Error rapper_ttl.log 
rapper: Error - URI http://purl.uniprot.org/:64855336 - Duplicated rdf:ID value '_A5D8AD4E37CF9FD9_6787AFEE56800A4A_aac_6__-Ib-cr'
rapper: Failed to parse file /data/store/rdf/uniprot/current/uniprot_taxon.rdf/0/562.rdf rdfxml content
--
rapper: Error - URI http://purl.uniprot.org/:58715 - Duplicated rdf:ID value '_995279B5D437B53A_up.name_B'
rapper: Failed to parse file /data/store/rdf/uniprot/current/uniprot_taxon.rdf/7000/7165.rdf rdfxml content
--
rapper: Error - URI http://purl.uniprot.org/:886953 - Duplicated rdf:ID value '_DD6D6503B621DAEB_up.name_B'
rapper: Failed to parse file /data/store/rdf/uniprot/current/uniprot_taxon.rdf/7000/7227.rdf rdfxml content
--
rapper: Error - URI http://purl.uniprot.org/:2830577 - Duplicated rdf:ID value '_3D5AA7A276B6E5CD_up.name_uORF'
rapper: Failed to parse file /data/store/rdf/uniprot/current/uniprot_taxon.rdf/9000/9606.rdf rdfxml content
--
rapper: Error - URI http://purl.uniprot.org/:7522864 - Duplicated rdf:ID value '_39E89B5C0559219E_up.name_Nesp55-1'
rapper: Failed to parse file /data/store/rdf/uniprot/current/uniprot_taxon.rdf/10000/10090.rdf rdfxml content
--
rapper: Error - URI http://purl.uniprot.org/:1507833 - Duplicated rdf:ID value '_51C15D37D6DA7884_up.name_1'
rapper: Failed to parse file /data/store/rdf/uniprot/current/uniprot_taxon.rdf/10000/10116.rdf rdfxml content
--
rapper: Error - URI http://purl.uniprot.org/:9873 - Duplicated rdf:ID value '_FB8BDA98F9648FFE_up.name_Glycoprotein_Q2'
rapper: Failed to parse file /data/store/rdf/uniprot/current/uniprot_taxon.rdf/10000/10370.rdf rdfxml content
--
rapper: Error - URI http://purl.uniprot.org/:5352 - Duplicated rdf:ID value '_1B1B90C5BA41A4A3_up.name_758C4C4246F18D27'
rapper: Failed to parse file /data/store/rdf/uniprot/current/uniprot_taxon.rdf/31000/31757.rdf rdfxml content
--
rapper: Error - URI http://purl.uniprot.org/:9865 - Duplicated rdf:ID value '_10B7A5D8D5C4A62D_up.name_PB2-S1'
rapper: Failed to parse file /data/store/rdf/uniprot/current/uniprot_taxon.rdf/88000/88776.rdf rdfxml content
--
rapper: Error - URI http://purl.uniprot.org/:8793 - Duplicated rdf:ID value '_CF9693AF023895B8_up.name_PB2-S1'
rapper: Failed to parse file /data/store/rdf/uniprot/current/uniprot_taxon.rdf/93000/93838.rdf rdfxml content
--
rapper: Error - URI http://purl.uniprot.org/:19136 - Duplicated rdf:ID value '_D3F998A4975CB483_up.name_PB2-S1'
rapper: Failed to parse file /data/store/rdf/uniprot/current/uniprot_taxon.rdf/211000/211044.rdf rdfxml content
--
rapper: Error - URI http://purl.uniprot.org/:7358 - Duplicated rdf:ID value '_B27CCB1323607423_up.name_PB2-S1'
rapper: Failed to parse file /data/store/rdf/uniprot/current/uniprot_taxon.rdf/382000/382838.rdf rdfxml content
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